DvirGJ20607 protein (Drosophila virilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DvirGJ20607

Uncharacterized protein, isoform A; Belongs to the glycosyltransferase 47 family. (757 aa)

Predicted Functional Partners:

DvirGJ20474

0.993

DvirGJ13376

0.698

DvirGJ13689

0.688

DvirGJ22317

0.626

DvirGJ13077

0.610

DvirGJ17976

0.587

DvirGJ20193

0.580

DvirGJ10173

0.562

DvirGJ20291

0.542

DvirGJ11071

0.542

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DvirGJ10173	DvirGJ13077	B4M4T4	B4LEP5	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.661
DvirGJ10173	DvirGJ13376	B4M4T4	B4LIB0	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	Uncharacterized protein.	0.616
DvirGJ10173	DvirGJ13689	B4M4T4	B4LF40	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.806
DvirGJ10173	DvirGJ17976	B4M4T4	B4M966	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	Uncharacterized protein.	0.709
DvirGJ10173	DvirGJ20193	B4M4T4	B4LK01	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	C5-epim_C domain-containing protein.	0.722
DvirGJ10173	DvirGJ20291	B4M4T4	B4LJ39	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	Sulfotransfer_1 domain-containing protein.	0.687
DvirGJ10173	DvirGJ20607	B4M4T4	B4LLN6	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	Uncharacterized protein, isoform A; Belongs to the glycosyltransferase 47 family.	0.562
DvirGJ10173	DvirGJ22317	B4M4T4	B4LLG6	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.	0.775
DvirGJ11071	DvirGJ20607	B4M578	B4LLN6	Uncharacterized protein.	Uncharacterized protein, isoform A; Belongs to the glycosyltransferase 47 family.	0.542
DvirGJ13077	DvirGJ10173	B4LEP5	B4M4T4	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	0.661
DvirGJ13077	DvirGJ13376	B4LEP5	B4LIB0	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Uncharacterized protein.	0.749
DvirGJ13077	DvirGJ13689	B4LEP5	B4LF40	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.650
DvirGJ13077	DvirGJ17976	B4LEP5	B4M966	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Uncharacterized protein.	0.546
DvirGJ13077	DvirGJ20193	B4LEP5	B4LK01	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	C5-epim_C domain-containing protein.	0.472
DvirGJ13077	DvirGJ20291	B4LEP5	B4LJ39	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Sulfotransfer_1 domain-containing protein.	0.562
DvirGJ13077	DvirGJ20474	B4LEP5	B4LNV8	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Uncharacterized protein; Belongs to the glycosyltransferase 47 family.	0.602
DvirGJ13077	DvirGJ20607	B4LEP5	B4LLN6	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Uncharacterized protein, isoform A; Belongs to the glycosyltransferase 47 family.	0.610
DvirGJ13077	DvirGJ22317	B4LEP5	B4LLG6	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.	0.706
DvirGJ13376	DvirGJ10173	B4LIB0	B4M4T4	Uncharacterized protein.	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	0.616
DvirGJ13376	DvirGJ13077	B4LIB0	B4LEP5	Uncharacterized protein.	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.749