Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DvirGJ10970 | DvirGJ11576 | B4M4M8 | B4LFW9 | MADF domain-containing protein. | Uncharacterized protein. | 0.940 |
DvirGJ10970 | DvirGJ19711 | B4M4M8 | B4LTM6 | MADF domain-containing protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | 0.943 |
DvirGJ10970 | DvirGJ21455 | B4M4M8 | B4LIM4 | MADF domain-containing protein. | C2H2-type domain-containing protein. | 0.575 |
DvirGJ11576 | DvirGJ10970 | B4LFW9 | B4M4M8 | Uncharacterized protein. | MADF domain-containing protein. | 0.940 |
DvirGJ11576 | DvirGJ19711 | B4LFW9 | B4LTM6 | Uncharacterized protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | 0.940 |
DvirGJ19711 | DvirGJ10970 | B4LTM6 | B4M4M8 | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | MADF domain-containing protein. | 0.943 |
DvirGJ19711 | DvirGJ11576 | B4LTM6 | B4LFW9 | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | Uncharacterized protein. | 0.940 |
DvirGJ21455 | DvirGJ10970 | B4LIM4 | B4M4M8 | C2H2-type domain-containing protein. | MADF domain-containing protein. | 0.575 |