pdm2 protein (Drosophila virilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

pdm2

POU domain protein. (508 aa)

Predicted Functional Partners:

DvirGJ11065

0.563

DvirGJ19060

0.562

hb

0.548

TfIIB

0.515

DvirGJ20225

0.511

DvirGJ23468

0.509

DvirGJ24046

0.504

DvirGJ13301

0.503

Kr

0.497

DvirGJ22384

0.478

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DvirGJ11065	DvirGJ20225	B4M568	B4LJM6	Uncharacterized protein.	Uncharacterized protein.	0.998
DvirGJ11065	DvirGJ23468	B4M568	B4LX82	Uncharacterized protein.	Uncharacterized protein.	0.999
DvirGJ11065	DvirGJ24046	B4M568	A0A0Q9WGL3	Uncharacterized protein.	Uncharacterized protein, isoform B.	0.876
DvirGJ11065	TfIIB	B4M568	B4LVD1	Uncharacterized protein.	TfIIB.	0.827
DvirGJ11065	pdm2	B4M568	B4MDL5	Uncharacterized protein.	POU domain protein.	0.563
DvirGJ13301	pdm2	B4LQF4	B4MDL5	Uncharacterized protein, isoform A.	POU domain protein.	0.503
DvirGJ19060	DvirGJ22384	B4M2X2	B4LMG0	Uncharacterized protein, isoform A.	BZIP domain-containing protein.	0.902
DvirGJ19060	TfIIB	B4M2X2	B4LVD1	Uncharacterized protein, isoform A.	TfIIB.	0.725
DvirGJ19060	pdm2	B4M2X2	B4MDL5	Uncharacterized protein, isoform A.	POU domain protein.	0.562
DvirGJ20225	DvirGJ11065	B4LJM6	B4M568	Uncharacterized protein.	Uncharacterized protein.	0.998
DvirGJ20225	DvirGJ23468	B4LJM6	B4LX82	Uncharacterized protein.	Uncharacterized protein.	0.999
DvirGJ20225	DvirGJ24046	B4LJM6	A0A0Q9WGL3	Uncharacterized protein.	Uncharacterized protein, isoform B.	0.876
DvirGJ20225	TfIIB	B4LJM6	B4LVD1	Uncharacterized protein.	TfIIB.	0.900
DvirGJ20225	pdm2	B4LJM6	B4MDL5	Uncharacterized protein.	POU domain protein.	0.511
DvirGJ22384	DvirGJ19060	B4LMG0	B4M2X2	BZIP domain-containing protein.	Uncharacterized protein, isoform A.	0.902
DvirGJ22384	pdm2	B4LMG0	B4MDL5	BZIP domain-containing protein.	POU domain protein.	0.478
DvirGJ23468	DvirGJ11065	B4LX82	B4M568	Uncharacterized protein.	Uncharacterized protein.	0.999
DvirGJ23468	DvirGJ20225	B4LX82	B4LJM6	Uncharacterized protein.	Uncharacterized protein.	0.999
DvirGJ23468	DvirGJ24046	B4LX82	A0A0Q9WGL3	Uncharacterized protein.	Uncharacterized protein, isoform B.	0.818
DvirGJ23468	TfIIB	B4LX82	B4LVD1	Uncharacterized protein.	TfIIB.	0.927