Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATP6 | ATPsyn-beta | B3LF06 | B4MEZ1 | ATP synthase subunit a. | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.982 |
ATP6 | DvirGJ10518 | B3LF06 | B4M5T2 | ATP synthase subunit a. | ATP synthase subunit gamma. | 0.999 |
ATP6 | DvirGJ10646 | B3LF06 | B4M5U7 | ATP synthase subunit a. | Uncharacterized protein, isoform A; Belongs to the ATPase C chain family. | 0.999 |
ATP6 | DvirGJ12126 | B3LF06 | B4LGA6 | ATP synthase subunit a. | Uncharacterized protein. | 0.999 |
ATP6 | DvirGJ14360 | B3LF06 | B4MB46 | ATP synthase subunit a. | ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...] | 0.972 |
ATP6 | DvirGJ19398 | B3LF06 | B4M1Y1 | ATP synthase subunit a. | ATP-synt_DE_N domain-containing protein. | 0.999 |
ATP6 | DvirGJ19972 | B3LF06 | B4LME8 | ATP synthase subunit a. | Uncharacterized protein. | 0.972 |
ATP6 | DvirGJ22050 | B3LF06 | B4LIV0 | ATP synthase subunit a. | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.999 |
ATP6 | DvirGJ22112 | B3LF06 | B4LJI2 | ATP synthase subunit a. | Uncharacterized protein. | 0.998 |
ATP6 | DvirGJ23589 | B3LF06 | B4LVY8 | ATP synthase subunit a. | Uncharacterized protein. | 0.990 |
ATPsyn-beta | ATP6 | B4MEZ1 | B3LF06 | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. | ATP synthase subunit a. | 0.982 |
ATPsyn-beta | DvirGJ10518 | B4MEZ1 | B4M5T2 | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. | ATP synthase subunit gamma. | 0.992 |
ATPsyn-beta | DvirGJ10646 | B4MEZ1 | B4M5U7 | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. | Uncharacterized protein, isoform A; Belongs to the ATPase C chain family. | 0.967 |
ATPsyn-beta | DvirGJ12126 | B4MEZ1 | B4LGA6 | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. | Uncharacterized protein. | 0.976 |
ATPsyn-beta | DvirGJ14360 | B4MEZ1 | B4MB46 | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. | ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...] | 0.949 |
ATPsyn-beta | DvirGJ19398 | B4MEZ1 | B4M1Y1 | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. | ATP-synt_DE_N domain-containing protein. | 0.982 |
ATPsyn-beta | DvirGJ19972 | B4MEZ1 | B4LME8 | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. | Uncharacterized protein. | 0.949 |
ATPsyn-beta | DvirGJ22050 | B4MEZ1 | B4LIV0 | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.993 |
ATPsyn-beta | DvirGJ22112 | B4MEZ1 | B4LJI2 | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. | Uncharacterized protein. | 0.940 |
ATPsyn-beta | DvirGJ23589 | B4MEZ1 | B4LVY8 | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. | Uncharacterized protein. | 0.940 |
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