STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DGUA_6G006487Blast:Angio-associated migratory cell protein. (427 aa)    
Predicted Functional Partners:
DGUA_6G019875
Blast:60S ribosomal protein L10.
    
 
 0.989
DGUA_6G003684
Blast:Glutamate-rich WD repeat-containing protein 1.
  
  
 0.946
DGUA_6G002709
Blast:Transducin beta-like protein 3.
  
    0.816
DGUA_6G011424
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
  
 0.727
DGUA_6G016281
Blast:Nucleotide exchange factor SIL1.
    
 
 0.726
DGUA_6G014930
Blast:Hsp70 nucleotide exchange factor fes1.
    
 
 0.726
DGUA_6G020640
Blast:39S ribosomal protein L16, mitochondrial.
    
 
 0.726
DGUA_6G002093
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
  
 0.713
DGUA_6G000918
Blast:U3 small nucleolar RNA-associated protein 18 homolog.
   
  
 0.704
DGUA_6G013482
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
  
  
 0.681
Your Current Organism:
Drosophila guanche
NCBI taxonomy Id: 7266
Other names: D. guanche
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