Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
DGUA_6G011716Blast:U5 small nuclear ribonucleoprotein 40 kDa protein. (347 aa)    
Predicted Functional Partners:
DGUA_6G003821
Blast:Pre-mRNA-processing-splicing factor 8.
   
 0.998
DGUA_6G007076
Blast:Pre-mRNA-processing factor 6.
   
 0.997
DGUA_6G006403
Blast:116 kDa U5 small nuclear ribonucleoprotein component.
   
 0.997
DGUA_6G011763
Blast:Probable ATP-dependent RNA helicase DDX23.
    
 0.996
DGUA_6G014887
Blast:Putative U5 small nuclear ribonucleoprotein 200 kDa helicase.
   
 0.996
DGUA_6G012803
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
    
 0.995
DGUA_6G005048
Small nuclear ribonucleoprotein Sm D2.
   
 0.985
DGUA_6G018860
PID domain-containing protein.
   
 0.985
DGUA_6G005100
Small nuclear ribonucleoprotein G.
   
  0.975
DGUA_6G003819
Small nuclear ribonucleoprotein Sm D3.
   
 0.962
Your Current Organism:
Drosophila guanche
NCBI taxonomy Id: 7266
Other names: D. guanche
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