DGUA_6G008158 protein (Drosophila guanche) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

DGUA_6G008158

Blast:Ubiquitin fusion degradation protein 1 homolog. (312 aa)

Predicted Functional Partners:

DGUA_6G013712

0.984

DGUA_6G001145

0.978

DGUA_6G012849

0.968

DGUA_6G003551

0.967

DGUA_6G009259

0.967

DGUA_6G009563

0.966

DGUA_6G018517

0.960

DGUA_6G013333

0.959

DGUA_6G009508

0.958

DGUA_6G001500

0.940

Your Current Organism:

Drosophila guanche

NCBI taxonomy Id: 7266
Other names: D. guanche

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DGUA_6G001145	DGUA_6G001500	A0A3B0JJL8	A0A3B0J074	Blast:Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family.	Blast:FAS-associated factor 1.	0.769
DGUA_6G001145	DGUA_6G003551	A0A3B0JJL8	A0A3B0JPX2	Blast:Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family.	Blast:NSFL1 cofactor p47.	0.997
DGUA_6G001145	DGUA_6G008158	A0A3B0JJL8	A0A3B0JBQ7	Blast:Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family.	Blast:Ubiquitin fusion degradation protein 1 homolog.	0.978
DGUA_6G001145	DGUA_6G009259	A0A3B0JJL8	A0A3B0KSS7	Blast:Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family.	Blast:UBX domain-containing protein 1-B.	0.994
DGUA_6G001145	DGUA_6G009508	A0A3B0JJL8	A0A3B0KFN6	Blast:Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family.	Blast:Ubiquitin thioesterase OTU1.	0.919
DGUA_6G001145	DGUA_6G009563	A0A3B0JJL8	A0A3B0K3H0	Blast:Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family.	Blast:Spermatogenesis-associated protein 5-like protein 1.	0.598
DGUA_6G001145	DGUA_6G012849	A0A3B0JJL8	A0A3B0JC23	Blast:Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family.	Blast:Phospholipase A-2-activating protein.	0.820
DGUA_6G001145	DGUA_6G013333	A0A3B0JJL8	A0A3B0JGX2	Blast:Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family.	Blast:Ubiquitin-40S ribosomal protein S27a.	0.807
DGUA_6G001145	DGUA_6G013712	A0A3B0JJL8	A0A3B0K228	Blast:Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family.	UBX domain-containing protein 7.	0.880
DGUA_6G001145	DGUA_6G018517	A0A3B0JJL8	A0A3B0KD30	Blast:Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.885
DGUA_6G001500	DGUA_6G001145	A0A3B0J074	A0A3B0JJL8	Blast:FAS-associated factor 1.	Blast:Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family.	0.769
DGUA_6G001500	DGUA_6G003551	A0A3B0J074	A0A3B0JPX2	Blast:FAS-associated factor 1.	Blast:NSFL1 cofactor p47.	0.910
DGUA_6G001500	DGUA_6G008158	A0A3B0J074	A0A3B0JBQ7	Blast:FAS-associated factor 1.	Blast:Ubiquitin fusion degradation protein 1 homolog.	0.940
DGUA_6G001500	DGUA_6G009259	A0A3B0J074	A0A3B0KSS7	Blast:FAS-associated factor 1.	Blast:UBX domain-containing protein 1-B.	0.947
DGUA_6G001500	DGUA_6G009563	A0A3B0J074	A0A3B0K3H0	Blast:FAS-associated factor 1.	Blast:Spermatogenesis-associated protein 5-like protein 1.	0.769
DGUA_6G001500	DGUA_6G012849	A0A3B0J074	A0A3B0JC23	Blast:FAS-associated factor 1.	Blast:Phospholipase A-2-activating protein.	0.796
DGUA_6G001500	DGUA_6G013333	A0A3B0J074	A0A3B0JGX2	Blast:FAS-associated factor 1.	Blast:Ubiquitin-40S ribosomal protein S27a.	0.447
DGUA_6G001500	DGUA_6G013712	A0A3B0J074	A0A3B0K228	Blast:FAS-associated factor 1.	UBX domain-containing protein 7.	0.673
DGUA_6G001500	DGUA_6G018517	A0A3B0J074	A0A3B0KD30	Blast:FAS-associated factor 1.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.561
DGUA_6G003551	DGUA_6G001145	A0A3B0JPX2	A0A3B0JJL8	Blast:NSFL1 cofactor p47.	Blast:Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family.	0.997