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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DGUA_6G012903Blast:Intracellular protein transport protein USO1. (661 aa)    
Predicted Functional Partners:
DGUA_6G015784
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
   
 0.682
DGUA_6G015585
Blast:Glutamate receptor ionotropic, kainate 2.
   
 0.677
DGUA_6G013106
Blast:Syntaxin-5; Belongs to the syntaxin family.
    
 0.674
DGUA_6G020383
Blast:General vesicular transport factor p115.
   
 0.636
DGUA_6G000124
Blast:Golgin subfamily A member 2.
   
 
 0.630
DGUA_6G016124
Blast:Unconventional myosin-XVIIIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.558
DGUA_6G005666
Blast:Regulator of G-protein signaling loco.
    
 0.541
DGUA_6G019795
Blast:Cyclin-G-associated kinase.
    
 0.541
DGUA_6G008959
Blast:Golgi resident protein GCP60.
    
 0.531
DGUA_6G017010
Blast:Tight junction protein ZO-1; Belongs to the MAGUK family.
    
 0.516
Your Current Organism:
Drosophila guanche
NCBI taxonomy Id: 7266
Other names: D. guanche
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