DGUA_6G012745 protein (Drosophila guanche) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

DGUA_6G012745

Blast:Ras-related protein Rab6. (208 aa)

Predicted Functional Partners:

DGUA_6G004459

0.983

DGUA_6G006912

0.981

DGUA_6G007380

0.978

DGUA_6G012988

0.970

DGUA_6G020947

0.970

DGUA_6G020946

0.970

DGUA_6G014000

0.960

DGUA_6G017228

0.956

DGUA_6G018779

0.953

DGUA_6G012378

0.942

Your Current Organism:

Drosophila guanche

NCBI taxonomy Id: 7266
Other names: D. guanche

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DGUA_6G004459	DGUA_6G006912	A0A3B0KHL9	A0A3B0JZ49	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	Blast:Protein RIC1 homolog.	0.669
DGUA_6G004459	DGUA_6G012745	A0A3B0KHL9	A0A3B0JGK2	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	Blast:Ras-related protein Rab6.	0.983
DGUA_6G004459	DGUA_6G017228	A0A3B0KHL9	A0A3B0KHN1	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	Blast:Retrograde Golgi transport protein RGP1 homolog.	0.479
DGUA_6G006912	DGUA_6G004459	A0A3B0JZ49	A0A3B0KHL9	Blast:Protein RIC1 homolog.	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	0.669
DGUA_6G006912	DGUA_6G007380	A0A3B0JZ49	A0A3B0J583	Blast:Protein RIC1 homolog.	Blast:ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.	0.842
DGUA_6G006912	DGUA_6G012378	A0A3B0JZ49	A0A3B0JAZ3	Blast:Protein RIC1 homolog.	Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.	0.951
DGUA_6G006912	DGUA_6G012745	A0A3B0JZ49	A0A3B0JGK2	Blast:Protein RIC1 homolog.	Blast:Ras-related protein Rab6.	0.981
DGUA_6G006912	DGUA_6G014000	A0A3B0JZ49	A0A3B0K820	Blast:Protein RIC1 homolog.	Blast:Vacuolar protein sorting-associated protein 52 homolog.	0.515
DGUA_6G006912	DGUA_6G017228	A0A3B0JZ49	A0A3B0KHN1	Blast:Protein RIC1 homolog.	Blast:Retrograde Golgi transport protein RGP1 homolog.	0.996
DGUA_6G006912	DGUA_6G018779	A0A3B0JZ49	A0A3B0K2Q7	Blast:Protein RIC1 homolog.	Blast:ADP-ribosylation factor-related protein 1.	0.826
DGUA_6G007380	DGUA_6G006912	A0A3B0J583	A0A3B0JZ49	Blast:ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.	Blast:Protein RIC1 homolog.	0.842
DGUA_6G007380	DGUA_6G012378	A0A3B0J583	A0A3B0JAZ3	Blast:ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.	Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.	0.933
DGUA_6G007380	DGUA_6G012745	A0A3B0J583	A0A3B0JGK2	Blast:ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.	Blast:Ras-related protein Rab6.	0.978
DGUA_6G007380	DGUA_6G014000	A0A3B0J583	A0A3B0K820	Blast:ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.	Blast:Vacuolar protein sorting-associated protein 52 homolog.	0.666
DGUA_6G007380	DGUA_6G017228	A0A3B0J583	A0A3B0KHN1	Blast:ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.	Blast:Retrograde Golgi transport protein RGP1 homolog.	0.717
DGUA_6G007380	DGUA_6G018779	A0A3B0J583	A0A3B0K2Q7	Blast:ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.	Blast:ADP-ribosylation factor-related protein 1.	0.844
DGUA_6G012378	DGUA_6G006912	A0A3B0JAZ3	A0A3B0JZ49	Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.	Blast:Protein RIC1 homolog.	0.951
DGUA_6G012378	DGUA_6G007380	A0A3B0JAZ3	A0A3B0J583	Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.	Blast:ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.	0.933
DGUA_6G012378	DGUA_6G012745	A0A3B0JAZ3	A0A3B0JGK2	Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.	Blast:Ras-related protein Rab6.	0.942
DGUA_6G012378	DGUA_6G014000	A0A3B0JAZ3	A0A3B0K820	Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.	Blast:Vacuolar protein sorting-associated protein 52 homolog.	0.866