Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
DGUA_6G013887Blast:Ubiquitin conjugation factor E4 B. (1203 aa)    
Predicted Functional Partners:
DGUA_6G019262
Blast:UV excision repair protein RAD23 homolog B.
   
 0.929
DGUA_6G008158
Blast:Ubiquitin fusion degradation protein 1 homolog.
    
 
 0.913
DGUA_6G019738
UBA domain-containing protein.
   
 0.910
DGUA_6G009508
Blast:Ubiquitin thioesterase OTU1.
    
 
 0.888
DGUA_6G018467
Blast:Protein unc-45 homolog A.
   
 
 0.879
DGUA_6G018466
Blast:Protein unc-45 homolog B.
   
 
 0.879
DGUA_6G009262
Blast:Ribonuclease Oy.
    
 
 0.873
DGUA_6G001145
Blast:Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family.
  
 
 0.872
DGUA_6G005217
Nicotinamide-nucleotide adenylyltransferase.
      
 0.867
DGUA_6G009742
Blast:26S proteasome non-ATPase regulatory subunit 4; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
   
 
 0.857
Your Current Organism:
Drosophila guanche
NCBI taxonomy Id: 7266
Other names: D. guanche
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