DGUA_6G004936 protein (Drosophila guanche) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

DGUA_6G004936

Blast:Neutral ceramidase; Belongs to the mitochondrial carrier (TC 2.A.29) family. (689 aa)

Predicted Functional Partners:

DGUA_6G001188

0.743

DGUA_6G015781

0.681

DGUA_6G001456

0.653

DGUA_6G010262

0.651

DGUA_6G013998

0.634

DGUA_6G012404

0.607

DGUA_6G017341

0.596

DGUA_6G015930

0.594

DGUA_6G016755

0.592

DGUA_6G010491

0.556

Your Current Organism:

Drosophila guanche

NCBI taxonomy Id: 7266
Other names: D. guanche

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DGUA_6G001188	DGUA_6G001456	A0A3B0JKA4	A0A3B0J059	Prohibitin.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.890
DGUA_6G001188	DGUA_6G004936	A0A3B0JKA4	A0A3B0JIF9	Prohibitin.	Blast:Neutral ceramidase; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.743
DGUA_6G001188	DGUA_6G010262	A0A3B0JKA4	A0A3B0JB65	Prohibitin.	Blast:NADH dehydrogenase.	0.776
DGUA_6G001188	DGUA_6G013998	A0A3B0JKA4	A0A3B0JII6	Prohibitin.	Blast:Cytochrome c oxidase assembly protein COX11, mitochondrial.	0.749
DGUA_6G001456	DGUA_6G001188	A0A3B0J059	A0A3B0JKA4	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	Prohibitin.	0.890
DGUA_6G001456	DGUA_6G004936	A0A3B0J059	A0A3B0JIF9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	Blast:Neutral ceramidase; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.653
DGUA_6G001456	DGUA_6G010262	A0A3B0J059	A0A3B0JB65	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	Blast:NADH dehydrogenase.	0.999
DGUA_6G001456	DGUA_6G012404	A0A3B0J059	A0A3B0JVM1	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	Blast:Cytochrome c oxidase subunit 6C.	0.857
DGUA_6G001456	DGUA_6G013998	A0A3B0J059	A0A3B0JII6	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	Blast:Cytochrome c oxidase assembly protein COX11, mitochondrial.	0.713
DGUA_6G001456	DGUA_6G015781	A0A3B0J059	A0A3B0K5M0	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	Blast:Mitochondrial import inner membrane translocase subunit Tim22.	0.946
DGUA_6G004936	DGUA_6G001188	A0A3B0JIF9	A0A3B0JKA4	Blast:Neutral ceramidase; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Prohibitin.	0.743
DGUA_6G004936	DGUA_6G001456	A0A3B0JIF9	A0A3B0J059	Blast:Neutral ceramidase; Belongs to the mitochondrial carrier (TC 2.A.29) family.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.653
DGUA_6G004936	DGUA_6G010262	A0A3B0JIF9	A0A3B0JB65	Blast:Neutral ceramidase; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Blast:NADH dehydrogenase.	0.651
DGUA_6G004936	DGUA_6G010491	A0A3B0JIF9	A0A3B0J778	Blast:Neutral ceramidase; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Blast:Ral GTPase-activating protein subunit beta.	0.556
DGUA_6G004936	DGUA_6G012404	A0A3B0JIF9	A0A3B0JVM1	Blast:Neutral ceramidase; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Blast:Cytochrome c oxidase subunit 6C.	0.607
DGUA_6G004936	DGUA_6G013998	A0A3B0JIF9	A0A3B0JII6	Blast:Neutral ceramidase; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Blast:Cytochrome c oxidase assembly protein COX11, mitochondrial.	0.634
DGUA_6G004936	DGUA_6G015781	A0A3B0JIF9	A0A3B0K5M0	Blast:Neutral ceramidase; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Blast:Mitochondrial import inner membrane translocase subunit Tim22.	0.681
DGUA_6G004936	DGUA_6G015930	A0A3B0JIF9	A0A3B0KVS3	Blast:Neutral ceramidase; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Blast:Inositol polyphosphate 1-phosphatase.	0.594
DGUA_6G004936	DGUA_6G016755	A0A3B0JIF9	A0A3B0JPT0	Blast:Neutral ceramidase; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Blast:Argininosuccinate synthase.	0.592
DGUA_6G004936	DGUA_6G017341	A0A3B0JIF9	A0A3B0KG51	Blast:Neutral ceramidase; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Blast:Polypyrimidine tract-binding protein 1.	0.596