DGUA_6G002248 protein (Drosophila guanche) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

DGUA_6G002248

Blast:F-box/LRR-repeat protein 6. (722 aa)

Predicted Functional Partners:

DGUA_6G003389

0.830

DGUA_6G006658

0.830

DGUA_6G015985

0.711

DGUA_6G014657

0.691

DGUA_6G008403

0.691

DGUA_6G006830

0.634

DGUA_6G010859

0.634

DGUA_6G001894

0.634

DGUA_6G002468

0.634

DGUA_6G010903

0.634

Your Current Organism:

Drosophila guanche

NCBI taxonomy Id: 7266
Other names: D. guanche

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DGUA_6G001894	DGUA_6G002248	A0A3B0JG07	A0A3B0JMQ8	Blast:S-phase kinase-associated protein 1; Belongs to the SKP1 family.	Blast:F-box/LRR-repeat protein 6.	0.634
DGUA_6G001894	DGUA_6G002468	A0A3B0JG07	A0A3B0JMJ2	Blast:S-phase kinase-associated protein 1; Belongs to the SKP1 family.	Blast:S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.544
DGUA_6G001894	DGUA_6G003389	A0A3B0JG07	A0A3B0J6U5	Blast:S-phase kinase-associated protein 1; Belongs to the SKP1 family.	Blast:Cullin homolog 1; Belongs to the cullin family.	0.998
DGUA_6G001894	DGUA_6G006658	A0A3B0JG07	A0A3B0JR73	Blast:S-phase kinase-associated protein 1; Belongs to the SKP1 family.	Blast:Cullin homolog 1; Belongs to the cullin family.	0.995
DGUA_6G001894	DGUA_6G006830	A0A3B0JG07	A0A3B0J8V4	Blast:S-phase kinase-associated protein 1; Belongs to the SKP1 family.	Blast:S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.544
DGUA_6G001894	DGUA_6G008403	A0A3B0JG07	A0A3B0KQX9	Blast:S-phase kinase-associated protein 1; Belongs to the SKP1 family.	Blast:RING-box protein 1A.	0.990
DGUA_6G001894	DGUA_6G010859	A0A3B0JG07	A0A3B0JDM6	Blast:S-phase kinase-associated protein 1; Belongs to the SKP1 family.	Blast:S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.544
DGUA_6G001894	DGUA_6G010903	A0A3B0JG07	A0A3B0JS47	Blast:S-phase kinase-associated protein 1; Belongs to the SKP1 family.	Blast:S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.544
DGUA_6G001894	DGUA_6G014657	A0A3B0JG07	A0A3B0KLY0	Blast:S-phase kinase-associated protein 1; Belongs to the SKP1 family.	Blast:RING-box protein 1B.	0.990
DGUA_6G002248	DGUA_6G001894	A0A3B0JMQ8	A0A3B0JG07	Blast:F-box/LRR-repeat protein 6.	Blast:S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.634
DGUA_6G002248	DGUA_6G002468	A0A3B0JMQ8	A0A3B0JMJ2	Blast:F-box/LRR-repeat protein 6.	Blast:S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.634
DGUA_6G002248	DGUA_6G003389	A0A3B0JMQ8	A0A3B0J6U5	Blast:F-box/LRR-repeat protein 6.	Blast:Cullin homolog 1; Belongs to the cullin family.	0.830
DGUA_6G002248	DGUA_6G006658	A0A3B0JMQ8	A0A3B0JR73	Blast:F-box/LRR-repeat protein 6.	Blast:Cullin homolog 1; Belongs to the cullin family.	0.830
DGUA_6G002248	DGUA_6G006830	A0A3B0JMQ8	A0A3B0J8V4	Blast:F-box/LRR-repeat protein 6.	Blast:S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.634
DGUA_6G002248	DGUA_6G008403	A0A3B0JMQ8	A0A3B0KQX9	Blast:F-box/LRR-repeat protein 6.	Blast:RING-box protein 1A.	0.691
DGUA_6G002248	DGUA_6G010859	A0A3B0JMQ8	A0A3B0JDM6	Blast:F-box/LRR-repeat protein 6.	Blast:S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.634
DGUA_6G002248	DGUA_6G010903	A0A3B0JMQ8	A0A3B0JS47	Blast:F-box/LRR-repeat protein 6.	Blast:S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.634
DGUA_6G002248	DGUA_6G014657	A0A3B0JMQ8	A0A3B0KLY0	Blast:F-box/LRR-repeat protein 6.	Blast:RING-box protein 1B.	0.691
DGUA_6G002248	DGUA_6G015985	A0A3B0JMQ8	A0A3B0KQM3	Blast:F-box/LRR-repeat protein 6.	Blast:Baculoviral IAP repeat-containing protein 5.	0.711
DGUA_6G002468	DGUA_6G001894	A0A3B0JMJ2	A0A3B0JG07	Blast:S-phase kinase-associated protein 1; Belongs to the SKP1 family.	Blast:S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.544