Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DGUA_6G001885Blast:Synaptogyrin-1. (208 aa)    
Predicted Functional Partners:
DGUA_6G020116
Blast:Cathepsin B; Belongs to the peptidase C1 family.
   
 0.657
DGUA_6G005811
Blast:Prosaposin.
   
 
 0.474
DGUA_6G017236
Blast:Putative cysteine proteinase CG12163.
   
 0.432
DGUA_6G017235
Blast:Putative cysteine proteinase CG12163; Belongs to the peptidase C1 family.
   
 0.432
DGUA_6G013038
Blast:40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.410
DGUA_6G010891
Blast:40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.410
DGUA_6G016167
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.409
Your Current Organism:
Drosophila guanche
NCBI taxonomy Id: 7266
Other names: D. guanche
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