Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DGUA_6G004707 | DGUA_6G007803 | A0A3B0JYE1 | A0A3B0JNS8 | Blast:Eukaryotic initiation factor 4A; Belongs to the DEAD box helicase family. | Uncharacterized protein. | 0.817 |
DGUA_6G004707 | DGUA_6G011711 | A0A3B0JYE1 | A0A3B0JTZ7 | Blast:Eukaryotic initiation factor 4A; Belongs to the DEAD box helicase family. | Blast:Eukaryotic peptide chain release factor GTP-binding subunit ERF3A. | 0.480 |
DGUA_6G004707 | DGUA_6G013204 | A0A3B0JYE1 | A0A3B0KD38 | Blast:Eukaryotic initiation factor 4A; Belongs to the DEAD box helicase family. | Blast:Nucleolar protein 58. | 0.482 |
DGUA_6G004707 | DGUA_6G018293 | A0A3B0JYE1 | A0A3B0JSR5 | Blast:Eukaryotic initiation factor 4A; Belongs to the DEAD box helicase family. | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...] | 0.684 |
DGUA_6G004707 | DGUA_6G019015 | A0A3B0JYE1 | A0A3B0K3G5 | Blast:Eukaryotic initiation factor 4A; Belongs to the DEAD box helicase family. | Blast:Regulator of nonsense transcripts 1 homolog. | 0.671 |
DGUA_6G004707 | PAN2 | A0A3B0JYE1 | A0A3B0JKW5 | Blast:Eukaryotic initiation factor 4A; Belongs to the DEAD box helicase family. | PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] | 0.622 |
DGUA_6G004707 | PAN3 | A0A3B0JYE1 | A0A3B0JPK7 | Blast:Eukaryotic initiation factor 4A; Belongs to the DEAD box helicase family. | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] | 0.514 |
DGUA_6G004707 | eIF3a | A0A3B0JYE1 | A0A3B0KSS1 | Blast:Eukaryotic initiation factor 4A; Belongs to the DEAD box helicase family. | Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. | 0.938 |
DGUA_6G005895 | DGUA_6G007803 | A0A3B0JKT0 | A0A3B0JNS8 | Blast:Nucleoplasmin-like protein. | Uncharacterized protein. | 0.896 |
DGUA_6G005895 | DGUA_6G013204 | A0A3B0JKT0 | A0A3B0KD38 | Blast:Nucleoplasmin-like protein. | Blast:Nucleolar protein 58. | 0.773 |
DGUA_6G005975 | DGUA_6G007803 | A0A3B0JL05 | A0A3B0JNS8 | Blast:Ataxin-2 homolog. | Uncharacterized protein. | 0.783 |
DGUA_6G005975 | DGUA_6G018293 | A0A3B0JL05 | A0A3B0JSR5 | Blast:Ataxin-2 homolog. | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...] | 0.590 |
DGUA_6G007803 | DGUA_6G004707 | A0A3B0JNS8 | A0A3B0JYE1 | Uncharacterized protein. | Blast:Eukaryotic initiation factor 4A; Belongs to the DEAD box helicase family. | 0.817 |
DGUA_6G007803 | DGUA_6G005895 | A0A3B0JNS8 | A0A3B0JKT0 | Uncharacterized protein. | Blast:Nucleoplasmin-like protein. | 0.896 |
DGUA_6G007803 | DGUA_6G005975 | A0A3B0JNS8 | A0A3B0JL05 | Uncharacterized protein. | Blast:Ataxin-2 homolog. | 0.783 |
DGUA_6G007803 | DGUA_6G011711 | A0A3B0JNS8 | A0A3B0JTZ7 | Uncharacterized protein. | Blast:Eukaryotic peptide chain release factor GTP-binding subunit ERF3A. | 0.723 |
DGUA_6G007803 | DGUA_6G013204 | A0A3B0JNS8 | A0A3B0KD38 | Uncharacterized protein. | Blast:Nucleolar protein 58. | 0.696 |
DGUA_6G007803 | DGUA_6G018293 | A0A3B0JNS8 | A0A3B0JSR5 | Uncharacterized protein. | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...] | 0.757 |
DGUA_6G007803 | DGUA_6G019015 | A0A3B0JNS8 | A0A3B0K3G5 | Uncharacterized protein. | Blast:Regulator of nonsense transcripts 1 homolog. | 0.705 |
DGUA_6G007803 | PAN2 | A0A3B0JNS8 | A0A3B0JKW5 | Uncharacterized protein. | PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] | 0.802 |
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