Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DGUA_6G016799Blast:Pre-mRNA 3'-end-processing factor FIP1. (699 aa)    
Predicted Functional Partners:
DGUA_6G003102
Blast:Cleavage and polyadenylation specificity factor subunit 1.
   
 0.999
DGUA_6G017932
Blast:pre-mRNA 3' end processing protein WDR33.
   
 0.999
DGUA_6G011918
Blast:Cleavage and polyadenylation specificity factor subunit 4.
    
 0.999
DGUA_6G015879
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.999
DGUA_6G015785
Blast:Cleavage and polyadenylation specificity factor 73.
   
 0.999
DGUA_6G017958
Blast:Symplekin.
   
 0.998
DGUA_6G008971
Blast:RNA polymerase II subunit A C-terminal domain phosphatase SSU72.
    
 0.998
DGUA_6G004836
Blast:WD repeat-containing protein 82.
   
 0.995
DGUA_6G015787
Blast:Zinc finger protein 544.
   
 0.993
DGUA_6G002848
Blast:Pre-mRNA cleavage complex 2 protein Pcf11.
    
 0.990
Your Current Organism:
Drosophila guanche
NCBI taxonomy Id: 7266
Other names: D. guanche
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