Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
DGUA_6G016925Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (436 aa)    
Predicted Functional Partners:
DGUA_6G001836
Blast:Paired amphipathic helix protein Sin3a.
   
 0.992
DGUA_6G017025
Blast:PHD finger protein 20-like protein 1.
    
 0.989
DGUA_6G016372
Blast:Methyl-CpG-binding domain protein 2.
    
 0.969
DGUA_6G007926
Blast:Chromodomain-helicase-DNA-binding protein Mi-2 homolog.
   
 0.963
DGUA_6G013859
Blast:NAD-dependent histone deacetylase Sir2.
    
 0.961
DGUA_6G021251
Histone H3; Belongs to the histone H3 family.
    
 0.960
DGUA_6G014526
Blast:Possible lysine-specific histone demethylase 1.
   
 0.956
DGUA_6G006087
Histone H2A; Belongs to the histone H2A family.
   
 0.953
DGUA_6G009853
Blast:Histone acetyltransferase KAT2A.
    
 0.953
DGUA_6G015724
Blast:Metastasis-associated protein MTA3.
    
 0.952
Your Current Organism:
Drosophila guanche
NCBI taxonomy Id: 7266
Other names: D. guanche
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