Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DGUA_6G016962Blast:Splicing factor 3A subunit 3. (503 aa)    
Predicted Functional Partners:
DGUA_6G007959
Blast:Splicing factor 3A subunit 2.
   
 0.999
DGUA_6G018004
Blast:Splicing factor 3A subunit 1.
   
 0.999
DGUA_6G015117
Blast:Calcium homeostasis endoplasmic reticulum protein.
   
 0.998
DGUA_6G020053
Blast:U1 small nuclear ribonucleoprotein A.
   
 0.990
DGUA_6G003251
Blast:Probable U2 small nuclear ribonucleoprotein A.
   
 0.986
DGUA_6G005038
Splicing factor 3B subunit 5; Belongs to the SF3B5 family.
   
 0.985
DGUA_6G009900
Blast:Splicing factor 3B subunit 3.
   
 0.976
DGUA_6G012630
Blast:Splicing factor 3B subunit 1.
   
 0.975
DGUA_6G012424
Blast:Splicing factor 3B subunit 2.
   
 0.972
DGUA_6G004006
Blast:Splicing factor 45.
   
 0.960
Your Current Organism:
Drosophila guanche
NCBI taxonomy Id: 7266
Other names: D. guanche
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