Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DGUA_6G006589Blast:RNA exonuclease 4. (263 aa)    
Predicted Functional Partners:
DGUA_6G006022
Blast:RNA-binding protein 34.
   
 0.959
DGUA_6G018258
Blast:Protein Peter pan.
   
   0.934
DGUA_6G001458
Blast:RNA-binding protein 28.
   
 
 0.929
DGUA_6G007370
Blast:ATP-dependent helicase brm.
   
 
 0.927
DGUA_6G000329
Blast:Sister chromatid cohesion protein DCC1.
  
 0.888
DGUA_6G000040
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
   
   0.862
DGUA_6G020644
Blast:WD repeat-containing protein 18.
   
  0.855
DGUA_6G017556
RNA helicase.
  
 0.843
DGUA_6G006590
Uncharacterized protein.
      
 0.831
DGUA_6G013204
Blast:Nucleolar protein 58.
   
 
 0.829
Your Current Organism:
Drosophila guanche
NCBI taxonomy Id: 7266
Other names: D. guanche
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