DGUA_6G003054 protein (Drosophila guanche) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

DGUA_6G003054

Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (100 aa)

Predicted Functional Partners:

DGUA_6G000297

0.999

DGUA_6G020992

0.999

DGUA_6G001416

0.995

DGUA_6G004141

0.995

DGUA_6G007816

0.991

DGUA_6G009323

0.991

DGUA_6G018873

0.991

DGUA_6G004875

0.975

DGUA_6G004112

0.968

DGUA_6G020401

0.957

Your Current Organism:

Drosophila guanche

NCBI taxonomy Id: 7266
Other names: D. guanche

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DGUA_6G000297	DGUA_6G001416	A0A3B0J1Y1	A0A3B0JK73	Blast:Probable protein transport protein Sec61 subunit gamma.	Uncharacterized protein.	0.942
DGUA_6G000297	DGUA_6G003054	A0A3B0J1Y1	A0A3B0JRG2	Blast:Probable protein transport protein Sec61 subunit gamma.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.999
DGUA_6G000297	DGUA_6G004112	A0A3B0J1Y1	A0A3B0KBT0	Blast:Probable protein transport protein Sec61 subunit gamma.	Blast:Translocation protein SEC62.	0.969
DGUA_6G000297	DGUA_6G004141	A0A3B0J1Y1	A0A3B0JU62	Blast:Probable protein transport protein Sec61 subunit gamma.	Blast:Translocon-associated protein subunit gamma.	0.978
DGUA_6G000297	DGUA_6G004875	A0A3B0J1Y1	A0A3B0KII4	Blast:Probable protein transport protein Sec61 subunit gamma.	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...]	0.836
DGUA_6G000297	DGUA_6G007816	A0A3B0J1Y1	A0A3B0J9V0	Blast:Probable protein transport protein Sec61 subunit gamma.	Blast:Translocation protein SEC63 homolog.	0.991
DGUA_6G000297	DGUA_6G009323	A0A3B0J1Y1	A0A3B0JY80	Blast:Probable protein transport protein Sec61 subunit gamma.	Translocon-associated protein subunit beta; TRAP proteins are part of a complex whose function is to bind calcium to the ER membrane and thereby regulate the retention of ER resident proteins.	0.861
DGUA_6G000297	DGUA_6G018873	A0A3B0J1Y1	A0A3B0K2W9	Blast:Probable protein transport protein Sec61 subunit gamma.	Blast:Translocation protein SEC63 homolog.	0.991
DGUA_6G000297	DGUA_6G020401	A0A3B0J1Y1	A0A3B0KM14	Blast:Probable protein transport protein Sec61 subunit gamma.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.959
DGUA_6G000297	DGUA_6G020992	A0A3B0J1Y1	A0A3B0KXD5	Blast:Probable protein transport protein Sec61 subunit gamma.	Blast:Protein transport protein Sec61 subunit alpha isoform 2.	0.999
DGUA_6G001416	DGUA_6G000297	A0A3B0JK73	A0A3B0J1Y1	Uncharacterized protein.	Blast:Probable protein transport protein Sec61 subunit gamma.	0.942
DGUA_6G001416	DGUA_6G003054	A0A3B0JK73	A0A3B0JRG2	Uncharacterized protein.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.995
DGUA_6G001416	DGUA_6G004141	A0A3B0JK73	A0A3B0JU62	Uncharacterized protein.	Blast:Translocon-associated protein subunit gamma.	0.999
DGUA_6G001416	DGUA_6G004875	A0A3B0JK73	A0A3B0KII4	Uncharacterized protein.	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...]	0.854
DGUA_6G001416	DGUA_6G009323	A0A3B0JK73	A0A3B0JY80	Uncharacterized protein.	Translocon-associated protein subunit beta; TRAP proteins are part of a complex whose function is to bind calcium to the ER membrane and thereby regulate the retention of ER resident proteins.	0.999
DGUA_6G001416	DGUA_6G020401	A0A3B0JK73	A0A3B0KM14	Uncharacterized protein.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.928
DGUA_6G001416	DGUA_6G020992	A0A3B0JK73	A0A3B0KXD5	Uncharacterized protein.	Blast:Protein transport protein Sec61 subunit alpha isoform 2.	0.957
DGUA_6G003054	DGUA_6G000297	A0A3B0JRG2	A0A3B0J1Y1	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	Blast:Probable protein transport protein Sec61 subunit gamma.	0.999
DGUA_6G003054	DGUA_6G001416	A0A3B0JRG2	A0A3B0JK73	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	Uncharacterized protein.	0.995
DGUA_6G003054	DGUA_6G004112	A0A3B0JRG2	A0A3B0KBT0	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	Blast:Translocation protein SEC62.	0.968