Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
DGUA_6G018107Blast:Survival of motor neuron-related-splicing factor 30. (243 aa)    
Predicted Functional Partners:
DGUA_6G012630
Blast:Splicing factor 3B subunit 1.
   
 0.979
DGUA_6G015117
Blast:Calcium homeostasis endoplasmic reticulum protein.
   
 0.978
DGUA_6G007959
Blast:Splicing factor 3A subunit 2.
    
 0.973
DGUA_6G002538
Blast:U2 snRNP-associated SURP motif-containing protein.
    
 0.971
DGUA_6G003251
Blast:Probable U2 small nuclear ribonucleoprotein A.
    
 0.962
DGUA_6G014701
Blast:Poly(U)-binding-splicing factor half pint.
   
 0.953
DGUA_6G014203
Blast:Uncharacterized protein CG9548.
   
 0.951
DGUA_6G012424
Blast:Splicing factor 3B subunit 2.
   
 0.946
DGUA_6G020053
Blast:U1 small nuclear ribonucleoprotein A.
   
 0.941
DGUA_6G007928
Blast:U4/U6 small nuclear ribonucleoprotein Prp3.
    
 
 0.931
Your Current Organism:
Drosophila guanche
NCBI taxonomy Id: 7266
Other names: D. guanche
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