Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DGUA_6G007153Blast:E3 ubiquitin-protein ligase listerin. (1744 aa)    
Predicted Functional Partners:
DGUA_6G018057
Blast:Nuclear export mediator factor NEMF homolog.
   
 0.993
DGUA_6G009529
Blast:Transcription factor 25.
   
 0.992
DGUA_6G007579
Blast:60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
    
 0.940
DGUA_6G018264
Blast:60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
 0.938
DGUA_6G019860
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
    
 0.914
DGUA_6G003521
Blast:60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
 0.912
DGUA_6G006916
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
    
 0.912
DGUA_6G004012
Blast:60S ribosomal protein L5.
    
  0.911
RpL32
Blast:60S ribosomal protein L32.
    
  0.911
DGUA_6G003048
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
    
  0.907
Your Current Organism:
Drosophila guanche
NCBI taxonomy Id: 7266
Other names: D. guanche
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