STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DGUA_6G013962Blast:Probable ATP-dependent RNA helicase DDX47; Belongs to the DEAD box helicase family. (518 aa)    
Predicted Functional Partners:
DGUA_6G004652
Blast:Neuroguidin.
   
 0.991
DGUA_6G008361
Blast:ESF1 homolog.
   
 
 0.984
DGUA_6G018690
Blast:WD repeat-containing protein 46.
   
 0.964
DGUA_6G007018
Blast:Probable ATP-dependent RNA helicase DDX52; Belongs to the DEAD box helicase family.
  
0.951
DGUA_6G018142
Blast:Protein RRP5 homolog.
   
 0.941
DGUA_6G011898
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.937
DGUA_6G002625
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 0.916
DGUA_6G005551
Blast:Nucleolar protein 14 homolog.
   
 0.914
DGUA_6G008585
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
   
 0.912
DGUA_6G020059
Blast:Something about silencing protein 10.
   
 0.902
Your Current Organism:
Drosophila guanche
NCBI taxonomy Id: 7266
Other names: D. guanche
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.