STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4K3Y5_EUTSAPMEI domain-containing protein; In the C-terminal section; belongs to the pectinesterase family. (704 aa)    
Predicted Functional Partners:
V4LF77_EUTSA
Pectate lyase.
  
 
 0.740
V4L3N9_EUTSA
Pectate lyase.
  
 
 0.739
V4KQY2_EUTSA
Pectate lyase.
  
 
 0.726
V4KSD8_EUTSA
Pectate lyase.
   
 
 0.676
V4L9H2_EUTSA
Uncharacterized protein.
     
 0.673
V4M7N1_EUTSA
Uncharacterized protein.
     
 0.673
V4N1N5_EUTSA
Uncharacterized protein.
     
 0.673
V4LPD9_EUTSA
Uncharacterized protein.
     
 0.661
V4M0P0_EUTSA
Uncharacterized protein.
     
 0.661
V4KPL3_EUTSA
PMEI domain-containing protein.
   
 
 0.659
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.