STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4K493_EUTSAIBB domain-containing protein. (504 aa)    
Predicted Functional Partners:
V4LTF3_EUTSA
Importin N-terminal domain-containing protein.
   
 0.843
V4NRC3_EUTSA
Importin N-terminal domain-containing protein.
   
 0.831
V4MF45_EUTSA
MIF4G domain-containing protein.
   
 
 0.812
V4LQ46_EUTSA
Nuclear cap-binding protein subunit 2.
    
 
 0.782
V4L945_EUTSA
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
    
   0.774
V4MAJ3_EUTSA
Importin N-terminal domain-containing protein.
  
 
 0.752
V4LA90_EUTSA
Importin N-terminal domain-containing protein.
   
 
 0.703
V4L3S3_EUTSA
RanBD1 domain-containing protein.
   
 
 0.677
V4KVN3_EUTSA
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.672
V4LGR9_EUTSA
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.672
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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