STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4KD87_EUTSAUncharacterized protein. (561 aa)    
Predicted Functional Partners:
V4LNF7_EUTSA
RNA_pol_L_2 domain-containing protein.
   
 0.883
V4L405_EUTSA
Uncharacterized protein.
   
 0.877
V4M5D3_EUTSA
RNA_pol_L_2 domain-containing protein.
   
 0.875
V4L391_EUTSA
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 0.872
V4KPG9_EUTSA
Uncharacterized protein.
   
 0.857
V4MUM0_EUTSA
Uncharacterized protein.
   
 0.857
V4M8V9_EUTSA
Uncharacterized protein.
   
 0.856
V4KSK0_EUTSA
RPOL4c domain-containing protein.
   
 0.850
V4L9F0_EUTSA
Uncharacterized protein.
   
 0.839
V4MMD3_EUTSA
Uncharacterized protein.
   
 0.839
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
Server load: low (16%) [HD]