STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4KIP0_EUTSABCAS3 domain-containing protein. (932 aa)    
Predicted Functional Partners:
V4LJ86_EUTSA
AP2/ERF domain-containing protein.
      
 0.559
V4L9S4_EUTSA
Uncharacterized protein.
      
0.547
V4NCS5_EUTSA
Uncharacterized protein.
      
 0.547
V4NXR4_EUTSA
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
      
 0.547
V4P0L0_EUTSA
Uncharacterized protein.
      
 0.547
V4LX08_EUTSA
Uncharacterized protein.
      
 0.545
V4MA30_EUTSA
Autophagy_act_C domain-containing protein.
      
 0.545
V4L7D1_EUTSA
Autophagy-related protein.
      
 0.544
V4MCD4_EUTSA
Toprim domain-containing protein.
      
 0.537
V4LU52_EUTSA
Uncharacterized protein.
   
  
 0.495
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.