STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4KKI8_EUTSAEndo/exonuclease/phosphatase domain-containing protein. (440 aa)    
Predicted Functional Partners:
V4KZN5_EUTSA
Uncharacterized protein.
   
 0.953
V4LDN5_EUTSA
Uncharacterized protein.
    
 0.935
V4N6M1_EUTSA
Uncharacterized protein.
    
 0.879
V4NMX0_EUTSA
Uncharacterized protein.
    
 0.879
V4L8M5_EUTSA
NOT2_3_5 domain-containing protein.
    
 0.856
V4LF67_EUTSA
NOT2_3_5 domain-containing protein.
    
 0.856
V4MPC6_EUTSA
Thioredoxin domain-containing protein.
    
 0.804
V4LPR1_EUTSA
Uncharacterized protein.
    
 0.741
V4LUW1_EUTSA
Uncharacterized protein.
   
 
 0.738
V4NEP9_EUTSA
Uncharacterized protein.
    
 0.735
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.