STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4KND9_EUTSAUncharacterized protein. (83 aa)    
Predicted Functional Partners:
V4LJ80_EUTSA
Uncharacterized protein.
  
 
0.976
V4KNI1_EUTSA
RRM domain-containing protein.
   
 0.941
V4KMP9_EUTSA
Uncharacterized protein.
    
  0.932
V4MFS3_EUTSA
Uncharacterized protein.
    
  0.932
V4KFD2_EUTSA
Uncharacterized protein.
   
   0.903
V4KR94_EUTSA
Uncharacterized protein.
   
 0.899
V4LK92_EUTSA
Uncharacterized protein.
    
   0.899
V4LU21_EUTSA
Uncharacterized protein.
    
   0.899
V4M0Q0_EUTSA
FAD-binding PCMH-type domain-containing protein.
    
   0.899
V4KGL4_EUTSA
RRM domain-containing protein.
   
 0.885
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.