STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4KRT0_EUTSAUncharacterized protein. (450 aa)    
Predicted Functional Partners:
V4MSS8_EUTSA
Uncharacterized protein.
  
     0.504
V4NIL4_EUTSA
Uncharacterized protein.
  
     0.461
V4LVQ2_EUTSA
ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.
      
 0.454
V4LQ09_EUTSA
Uncharacterized protein.
  
     0.453
V4LG33_EUTSA
Uncharacterized protein.
  
     0.447
V4NFB3_EUTSA
Uncharacterized protein.
  
     0.440
V4MSL0_EUTSA
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
     0.430
V4KL34_EUTSA
Uncharacterized protein.
  
     0.429
V4LF52_EUTSA
Jas domain-containing protein.
  
     0.423
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.