STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4KTM3_EUTSAABC transporter domain-containing protein. (733 aa)    
Predicted Functional Partners:
V4KWW6_EUTSA
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
  
 0.552
V4NQL3_EUTSA
PlsC domain-containing protein.
   
  
 0.530
V4KIB6_EUTSA
Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.
   
  
 0.464
V4LUX5_EUTSA
Uncharacterized protein.
   
  
 0.447
V4NKF3_EUTSA
Uncharacterized protein.
   
  
 0.443
V4LDS4_EUTSA
PlsC domain-containing protein.
   
  
 0.428
V4LK52_EUTSA
Uncharacterized protein.
    
 0.425
V4LFK9_EUTSA
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
  
 0.424
V4M327_EUTSA
MFS domain-containing protein.
      
 0.424
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.