STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4L206_EUTSAAP2/ERF domain-containing protein. (280 aa)    
Predicted Functional Partners:
V4M270_EUTSA
YrdC-like domain-containing protein.
      
 0.551
V4JXY9_EUTSA
PAP_fibrillin domain-containing protein.
      
 0.474
V4LQQ3_EUTSA
DUF4101 domain-containing protein.
  
     0.457
V4LD30_EUTSA
Uncharacterized protein.
  
     0.447
V4LR34_EUTSA
Uncharacterized protein.
  
     0.447
V4KQZ2_EUTSA
TPM_phosphatase domain-containing protein.
  
     0.436
V4N857_EUTSA
Uncharacterized protein.
  
     0.436
V4LVV6_EUTSA
Uncharacterized protein.
  
     0.434
V4KM61_EUTSA
HTH myb-type domain-containing protein.
      
 0.424
V4N5Q5_EUTSA
RING-CH-type domain-containing protein.
      
 0.422
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.