STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4L327_EUTSAUncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (275 aa)    
Predicted Functional Partners:
V4NAF4_EUTSA
TPR_REGION domain-containing protein.
    
 0.920
V4LI56_EUTSA
RING-type domain-containing protein.
     
 0.794
V4LM07_EUTSA
SCP2 domain-containing protein.
   
 0.788
V4M0M3_EUTSA
Pex2_Pex12 domain-containing protein.
     
 0.785
V4KWD2_EUTSA
MaoC-like domain-containing protein.
   
 0.762
V4M8S2_EUTSA
Uncharacterized protein.
   
 0.762
V4MJT1_EUTSA
Pex14_N domain-containing protein.
    
 0.740
V4MGR8_EUTSA
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.708
V4NZ01_EUTSA
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.708
V4MN80_EUTSA
Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
0.701
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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