STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4L723_EUTSAFmp27_GFWDK domain-containing protein. (2536 aa)    
Predicted Functional Partners:
V4KBK8_EUTSA
Tr-type G domain-containing protein.
   
 0.761
V4LF15_EUTSA
Tr-type G domain-containing protein.
   
 0.761
V4JRA7_EUTSA
Uncharacterized protein.
  
 0.710
V4MTI1_EUTSA
Uncharacterized protein.
    
 0.681
V4M5V2_EUTSA
Trigger_N domain-containing protein.
    
  0.636
V4L1T9_EUTSA
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
  0.635
V4LCD8_EUTSA
MRP-S28 domain-containing protein.
   
 0.631
V4LZU7_EUTSA
Uncharacterized protein.
    
  0.629
V4LA35_EUTSA
Uncharacterized protein.
  
    0.596
V4MRI9_EUTSA
Uncharacterized protein; Belongs to the DOCK family.
  
    0.563
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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