STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4LFP0_EUTSAPHD-type domain-containing protein. (1075 aa)    
Predicted Functional Partners:
V4KI03_EUTSA
Uncharacterized protein.
    
  0.618
V4KZQ5_EUTSA
Uncharacterized protein.
    
 0.589
V4KW14_EUTSA
PHD domain-containing protein.
      
 0.545
V4KIN1_EUTSA
SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.
    
 
 0.537
V4LC68_EUTSA
Nudix hydrolase domain-containing protein.
   
 0.528
V4L8H5_EUTSA
Uncharacterized protein.
    
 0.452
V4KZN5_EUTSA
Uncharacterized protein.
    
 
 0.447
V4L127_EUTSA
ENTH domain-containing protein.
      
 0.438
V4KVG7_EUTSA
ENTH domain-containing protein.
  
   
 0.437
V4KZ20_EUTSA
S1 motif domain-containing protein.
    
 0.431
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.