STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4LGV0_EUTSADTW domain-containing protein. (396 aa)    
Predicted Functional Partners:
V4LQL1_EUTSA
DTW domain-containing protein.
      
 0.606
V4MW93_EUTSA
DTW domain-containing protein.
      
 0.606
V4KUE3_EUTSA
tRNA (guanine(26)-N(2))-dimethyltransferase.
      
 0.596
V4L2D3_EUTSA
Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
      
 0.596
V4KRB2_EUTSA
tRNA-dihydrouridine synthase; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs; Belongs to the dus family.
   
  
 0.560
V4KSM0_EUTSA
Probable ribosome biogenesis protein EUTSA_v10014396mg; Probable pre-rRNA processing protein involved in ribosome biogenesis.
      
 0.559
V4L5H2_EUTSA
Uncharacterized protein.
      
 0.558
V4M2Q3_EUTSA
PPM-type phosphatase domain-containing protein.
      
 0.505
V4LYK4_EUTSA
Uncharacterized protein.
      
 0.422
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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