STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4LMG3_EUTSAUncharacterized protein. (520 aa)    
Predicted Functional Partners:
V4KPT2_EUTSA
SAM-dependent MTase TRM10-type domain-containing protein.
   
  
 0.631
V4KAL5_EUTSA
Uncharacterized protein.
     
 0.623
V4KX63_EUTSA
Uncharacterized protein.
     
 0.623
V4L3B5_EUTSA
SAM_MT_TRM5_TYW2 domain-containing protein.
   
  
 0.622
V4M030_EUTSA
Inosine triphosphate pyrophosphatase; Pyrophosphatase that hydrolyzes non-canonical purine nucleotides such as inosine triphosphate (ITP), deoxyinosine triphosphate (dITP) or xanthosine 5'-triphosphate (XTP) to their respective monophosphate derivatives. The enzyme does not distinguish between the deoxy- and ribose forms. Probably excludes non-canonical purines from RNA and DNA precursor pools, thus preventing their incorporation into RNA and DNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
   
  
 0.618
V4M027_EUTSA
tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.612
V4L8Y7_EUTSA
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.
   
  
 0.605
V4MBI7_EUTSA
AA_TRNA_LIGASE_II domain-containing protein.
    
 
 0.583
V4MCC7_EUTSA
Uncharacterized protein.
    
 
 0.583
V4NC95_EUTSA
AA_TRNA_LIGASE_II domain-containing protein.
    
 
 0.583
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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