STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4LPC8_EUTSAF-box domain-containing protein. (287 aa)    
Predicted Functional Partners:
V4LT77_EUTSA
F-box domain-containing protein.
  
     0.519
V4K161_EUTSA
F-box domain-containing protein.
  
 
   0.509
V4KE13_EUTSA
Uncharacterized protein.
  
     0.509
V4MP09_EUTSA
Uncharacterized protein.
  
     0.508
V4LSH0_EUTSA
C2H2-type domain-containing protein.
  
     0.507
V4JW34_EUTSA
F-box domain-containing protein.
  
     0.502
V4LQC0_EUTSA
F-box domain-containing protein.
  
     0.491
V4KHD2_EUTSA
F-box domain-containing protein.
  
     0.489
V4MQ44_EUTSA
Uncharacterized protein.
  
     0.485
V4JXU0_EUTSA
Uncharacterized protein.
  
     0.483
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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