STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4LVC2_EUTSAt-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (215 aa)    
Predicted Functional Partners:
V4N9Y0_EUTSA
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.986
V4KSK9_EUTSA
V-SNARE domain-containing protein.
   
 0.966
V4L9K7_EUTSA
V-SNARE domain-containing protein.
   
 0.966
V4JSM2_EUTSA
V-SNARE domain-containing protein.
   
 0.962
V4KYS3_EUTSA
V-SNARE domain-containing protein.
   
 0.962
V4L2E7_EUTSA
TPR_REGION domain-containing protein.
    
 0.952
V4L2G8_EUTSA
Uncharacterized protein.
    
 0.888
V4L702_EUTSA
Uncharacterized protein.
    
 0.862
V4KZX4_EUTSA
RING-type domain-containing protein.
    
 
 0.846
V4M8C0_EUTSA
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.831
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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