STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4LWJ0_EUTSADirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. (262 aa)    
Predicted Functional Partners:
V4LD11_EUTSA
PMR5N domain-containing protein.
  
   
 0.634
V4KME3_EUTSA
Uncharacterized protein.
      
 0.545
V4L9B8_EUTSA
RING-type domain-containing protein.
      
 0.545
V4LKG8_EUTSA
Lipase_GDSL domain-containing protein; Belongs to the 'GDSL' lipolytic enzyme family.
      
 0.545
V4MRV4_EUTSA
HMA domain-containing protein.
  
     0.533
V4KC88_EUTSA
Uncharacterized protein.
  
  0.531
V4L0W7_EUTSA
F-box domain-containing protein.
  
     0.530
V4M1P3_EUTSA
PLAT domain-containing protein.
  
  0.529
V4MQR9_EUTSA
Uncharacterized protein.
  
 
  0.529
V4KJG6_EUTSA
PLAT domain-containing protein.
  
  0.527
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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