STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4LX35_EUTSAMSP domain-containing protein. (297 aa)    
Predicted Functional Partners:
V4KAL5_EUTSA
Uncharacterized protein.
    
 
 0.598
V4KCS6_EUTSA
Uncharacterized protein; Belongs to the actin family.
   
 
 0.586
V4KXC6_EUTSA
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
 
 0.585
V4LNZ2_EUTSA
WD_REPEATS_REGION domain-containing protein.
      
 0.578
V4K3G5_EUTSA
WD_REPEATS_REGION domain-containing protein.
    
 
 0.575
V4KX63_EUTSA
Uncharacterized protein.
    
 
 0.567
V4KKG9_EUTSA
Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.
   
  
 0.560
V4KJA0_EUTSA
PH domain-containing protein.
    
 0.555
V4L8U2_EUTSA
PH domain-containing protein.
    
 0.555
V4LEL3_EUTSA
PH domain-containing protein.
    
 0.555
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.