STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4M2G5_EUTSAUncharacterized protein. (428 aa)    
Predicted Functional Partners:
V4JXV3_EUTSA
PMD domain-containing protein.
   
 0.699
V4KGL0_EUTSA
PMD domain-containing protein.
   
 0.699
V4KKD0_EUTSA
PMD domain-containing protein.
   
 0.699
V4KSN8_EUTSA
PMD domain-containing protein.
   
 0.699
V4MG67_EUTSA
RRM domain-containing protein.
   
 0.699
V4NYX9_EUTSA
PMD domain-containing protein.
   
 0.699
V4P8A1_EUTSA
PMD domain-containing protein.
   
 0.699
V4MMM2_EUTSA
Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.
   
 0.582
V4LFQ7_EUTSA
TPR_REGION domain-containing protein.
   
 
 0.576
V4L2J7_EUTSA
AB hydrolase-1 domain-containing protein.
   
  
 0.555
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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