STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4M2I5_EUTSAUncharacterized protein. (388 aa)    
Predicted Functional Partners:
V4NX55_EUTSA
Uncharacterized protein.
  
  0.555
V4LS84_EUTSA
Uncharacterized protein.
   
 0.542
V4M4J5_EUTSA
C2 domain-containing protein.
  
 
  0.541
V4LGK6_EUTSA
C2 domain-containing protein.
  
 
  0.540
V4LND5_EUTSA
Uncharacterized protein.
  
 
 0.522
V4MBS5_EUTSA
Uncharacterized protein.
    
 0.522
V4ND27_EUTSA
Zinc_ribbon_12 domain-containing protein.
  
 
   0.520
V4KIT7_EUTSA
Zinc_ribbon_12 domain-containing protein.
  
 
   0.505
V4L6N0_EUTSA
Uncharacterized protein.
  
     0.500
V4KZI1_EUTSA
Zinc_ribbon_12 domain-containing protein.
  
 
   0.499
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
Server load: low (16%) [HD]