STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4M891_EUTSAFe2OG dioxygenase domain-containing protein. (455 aa)    
Predicted Functional Partners:
V4KR94_EUTSA
Uncharacterized protein.
      
 0.589
V4MFQ1_EUTSA
Fe2OG dioxygenase domain-containing protein.
   
  
 0.550
V4NEW9_EUTSA
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene).
      
 0.547
V4L533_EUTSA
Uncharacterized protein; Belongs to the MT-A70-like family.
   
  
 0.516
V4MS05_EUTSA
LigB domain-containing protein.
      
 0.454
V4KPS9_EUTSA
Methyltransf_11 domain-containing protein.
   
  
 0.441
V4L7Z7_EUTSA
Uncharacterized protein; Belongs to the MT-A70-like family.
   
  
 0.427
V4KL14_EUTSA
Uncharacterized protein; Belongs to the MT-A70-like family.
   
  
 0.420
V4KW48_EUTSA
JmjC domain-containing protein.
   
  
 0.420
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.