STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4MAG6_EUTSAPMR5N domain-containing protein. (469 aa)    
Predicted Functional Partners:
V4NC91_EUTSA
Uncharacterized protein.
    
 0.839
V4L7D5_EUTSA
Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family.
  
   
 0.597
V4KAF1_EUTSA
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
  0.570
V4MIX6_EUTSA
Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family.
  
   
 0.559
V4M3I0_EUTSA
Uncharacterized protein.
      
 0.549
V4M013_EUTSA
Germin-like protein.
     
 0.548
V4JTB5_EUTSA
Urease; In the C-terminal section; belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
    
 0.545
V4KT15_EUTSA
F-box domain-containing protein.
    
 0.545
V4L3W5_EUTSA
Dynein light chain.
    
 0.545
V4LFW1_EUTSA
Cas1_AcylT domain-containing protein.
      
 0.545
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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