STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4MD02_EUTSAAconitase_C domain-containing protein. (250 aa)    
Predicted Functional Partners:
V4M7K4_EUTSA
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
 
 0.991
V4LCE8_EUTSA
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
 
 0.990
V4M9C9_EUTSA
Pyruvate carboxyltransferase domain-containing protein.
  
 
 0.984
V4MT15_EUTSA
Pyruvate carboxyltransferase domain-containing protein.
  
 
 0.984
V4M074_EUTSA
Uncharacterized protein.
  
 0.979
V4LBR5_EUTSA
Uncharacterized protein.
 
 
 0.938
V4MK66_EUTSA
Aconitase_C domain-containing protein.
  
 
 
0.923
V4MJU6_EUTSA
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 
 0.830
V4MR99_EUTSA
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 
 0.830
V4M7Y7_EUTSA
Malic enzyme.
  
 
 0.816
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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