STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4MH03_EUTSACupin_3 domain-containing protein. (139 aa)    
Predicted Functional Partners:
V4NBH4_EUTSA
Uncharacterized protein.
      
 0.567
V4NG39_EUTSA
PfkB domain-containing protein.
   
  
 0.556
V4KGB8_EUTSA
Protein kinase domain-containing protein.
      
 0.547
V4KG94_EUTSA
Uncharacterized protein.
      
 0.545
V4MB45_EUTSA
SAP domain-containing protein.
      
 0.545
V4LUQ3_EUTSA
Cupin_3 domain-containing protein.
  
     0.505
V4K9F7_EUTSA
Smr domain-containing protein.
      
 0.439
V4L0Y4_EUTSA
NAD(P)-bd_dom domain-containing protein.
      
 0.422
V4MI67_EUTSA
PG_binding_1 domain-containing protein.
      
 0.410
V4MQH6_EUTSA
Uncharacterized protein.
      
 0.410
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.