STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4MKS2_EUTSAKOW domain-containing protein. (146 aa)    
Predicted Functional Partners:
V4KR87_EUTSA
Ribosomal_L18_c domain-containing protein.
  
 0.997
V4LV04_EUTSA
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
  
 0.997
V4P958_EUTSA
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.
   
 0.997
V4KM30_EUTSA
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.996
V4JQ38_EUTSA
Ribosomal_L7Ae domain-containing protein.
   
 0.989
V4LW38_EUTSA
Ribosomal_L7Ae domain-containing protein.
   
 0.989
V4M5S2_EUTSA
Ribosomal_L28e domain-containing protein.
   
 0.989
V4P4A1_EUTSA
Ribosomal_L28e domain-containing protein.
   
 0.989
V4KS92_EUTSA
Ribosomal protein L37; Binds to the 23S rRNA.
  
 0.988
V4LED4_EUTSA
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.988
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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