STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4MRT0_EUTSACASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family. (194 aa)    
Predicted Functional Partners:
V4N6U3_EUTSA
AAI domain-containing protein; Belongs to the plant LTP family.
   
  
 0.565
V4LDN3_EUTSA
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
   
0.510
V4LBE9_EUTSA
PORR domain-containing protein.
  
     0.498
V4KCP4_EUTSA
Uncharacterized protein.
  
     0.488
V4KPQ4_EUTSA
C2 domain-containing protein.
  
     0.482
V4NAT0_EUTSA
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.461
V4KAE3_EUTSA
PORR domain-containing protein.
  
     0.458
V4K157_EUTSA
PORR domain-containing protein.
  
     0.453
V4LC15_EUTSA
Uncharacterized protein.
  
     0.453
V4K105_EUTSA
Uncharacterized protein.
  
     0.450
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.