STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4N4Z0_EUTSAUncharacterized protein. (882 aa)    
Predicted Functional Partners:
V4KJQ0_EUTSA
Peptidylprolyl isomerase.
    
 
 0.858
V4KR87_EUTSA
Ribosomal_L18_c domain-containing protein.
    
   0.720
V4MTQ1_EUTSA
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 
 0.667
V4NXY5_EUTSA
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 
 0.667
V4LUW1_EUTSA
Uncharacterized protein.
   
  
 0.601
V4KGX4_EUTSA
Ribosomal_L18_c domain-containing protein.
    
   0.596
V4LV04_EUTSA
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
    
 
 0.594
V4NK68_EUTSA
DNA primase; Belongs to the eukaryotic-type primase small subunit family.
   
    0.590
V4KM30_EUTSA
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
    
   0.582
V4LF62_EUTSA
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
    
   0.576
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.