STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4N5H9_EUTSAUncharacterized protein. (326 aa)    
Predicted Functional Partners:
V4MTN0_EUTSA
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.884
V4JSQ7_EUTSA
Uncharacterized protein.
   
 0.867
V4M730_EUTSA
Uncharacterized protein.
    
 0.867
V4LLT6_EUTSA
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.858
V4LND6_EUTSA
WD_REPEATS_REGION domain-containing protein.
   
 0.838
V4KFS5_EUTSA
SFM domain-containing protein.
    
 0.829
V4KUD6_EUTSA
S4 RNA-binding domain-containing protein.
   
  0.826
V4KWR8_EUTSA
WD_REPEATS_REGION domain-containing protein.
   
 0.815
V4NAY4_EUTSA
WD_REPEATS_REGION domain-containing protein.
   
 0.815
V4LJQ7_EUTSA
CBF domain-containing protein.
   
 0.811
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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